Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950058.1_cds_XP_016490685.1_81087
CDS Infomation

[gene=LOC107810419] [db_xref=GeneID:107810419] [protein=putative tRNA pseudouridine synthase isoform X3] [protein_id=XP_016490685.1] [location=complement(join(10789..11214,11716..12165,12437..12581,20797..20945,21052..21164,24734..24740))] [gbkey=CDS]
Sequence

ATGTCAGCCATTGAAGGTGAACTGGAAAAAGCTATCTTCAAAGCTGGAGGTATTCGAGAC
AGTAATTTTGGAAACTTATATAAAATTGGTTGGGCGAGAAGTAGTCGAACAGATAAAGGA
GTTCATTCATTGTCGACCATGATATCTCTTAAAATGGAGATCCCGGAAGATGCATGGCAG
GATGACCCAAACGGGATTTCTCTTGCTAATTGTGTGAACTCATACCTCCCAGAGAACATC
AGAGTTTTCAGTATCCTACCCTCAAAAAAGAGGTTTGATGCCAGAAGGGAGTGTAATGCA
CGCAAGTATTCTTATCTACTTCCTGCTGAAATCATCGGGATAAAGAATGGCTCAACTTCT
TCTGAAATTGATTACCATTTATCCAGTTTTAATGACATATTGAACTCTTTCGAGGGAGAG
CATCCTTTCCACAACTACACAATACGATCCAAGTACAGGAAACATTCTCCTGCCAGAAAA
TTGTTACAATATGATTGTCTCTTAAAAAAAGGGAGACCCTCGACTGAGGAAGAAATATCT
TGGTGTGAGGAAAGCGATGGAGAAGAAAACTGTAAAGAGAAGGGGGTTGTGACAACTGTT
GAGGATGAAAATCAAAATCCAGTATGCAACTTGTCTACTAGAAATCAGGCAGGCAACTAT
AATGAGAAACTCAGTCATTCAAAGGAACTATATTCTGCGTTACCAATCCTAGCAAGATGG
CTCCATGAAACTGATGCAAGAGATAAGCTTAGCTCTGCCCATTTCCGAAGGATTTTTCAC
TGTCATTGTGGAAAGTTGGAGAAGTTGCTGAGCATGAATTACGTTGAAGTTTCTATCTGT
GGAGAATCATTCATGTTACATCAAATACGCAAAATGGTGGGGACTGCAGTTGCAATAAAA
CGCAATCTTCTACCACCTGATGTTTTGAGAATGTCATTATGCAAATTTTCAAGGATTGTC
TTACCCCTAGCCCCATCGGAAGTTTTGGTTTTGAAGGGGAACAATTTTGCTTTGAGAAAC
CAACCTGGCAACATAACAAGACCTGAAATGCTGACATTACTGGAATCCGAAGATATTATC
AAGGCAGTAGATGAGTTCTATTACTCCACAATGTTAACTCAGCTGTCTAAATTTTTGGAC
CCCGCAAAATATCCTTGGAGTGACTGGGTAGAGATACTGGATGCAAACACAAGGATTCCA
GAATCCCAATTGGAAGAAGTAAGGATTTCTTGGAAATTATGGAAGGAACAGTATGAAAGC
AGAACTAAGGCTCCATCAGTATTGACCTAA

Peptide Sequence

PEP ID

XP_016490685.1
PEP Infomation

PREDICTED: putative tRNA pseudouridine synthase isoform X3 [Nicotiana tabacum]
Sequence

MSAIEGELEKAIFKAGGIRDSNFGNLYKIGWARSSRTDKGVHSLSTMISLKMEIPEDAWQ
DDPNGISLANCVNSYLPENIRVFSILPSKKRFDARRECNARKYSYLLPAEIIGIKNGSTS
SEIDYHLSSFNDILNSFEGEHPFHNYTIRSKYRKHSPARKLLQYDCLLKKGRPSTEEEIS
WCEESDGEENCKEKGVVTTVEDENQNPVCNLSTRNQAGNYNEKLSHSKELYSALPILARW
LHETDARDKLSSAHFRRIFHCHCGKLEKLLSMNYVEVSICGESFMLHQIRKMVGTAVAIK
RNLLPPDVLRMSLCKFSRIVLPLAPSEVLVLKGNNFALRNQPGNITRPEMLTLLESEDII
KAVDEFYYSTMLTQLSKFLDPAKYPWSDWVEILDANTRIPESQLEEVRISWKLWKEQYES
RTKAPSVLT

Transcript Sequence

Gene sequence data has not been registered.